PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_25177
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family TCP
Protein Properties Length: 251aa    MW: 27085.3 Da    PI: 7.2447
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_25177genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP120.12.7e-3752138281
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.......eaesssss 81 
                  +k+++++++hTkv+gR+RR+R++a+caar+F+L+ eLG+++d++ti WLlqqa+pai++ tgt++++a++        +++ss s+
  PEQU_25177  52 SPKRSSTKDRHTKVDGRGRRIRMPALCAARVFQLTHELGLKSDGETIKWLLQQAEPAIIASTGTGTIPANFNslnislcNSDSSISA 138
                 689*************************************************************99999555423322122222222 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.2E-3457145IPR005333Transcription factor, TCP
PROSITE profilePS5136925.49958112IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MMDGVEPIDT GILSHHSNLP LQFLQKKESK ELPISSSSAN HHHSISTNPK PSPKRSSTKD  60
RHTKVDGRGR RIRMPALCAA RVFQLTHELG LKSDGETIKW LLQQAEPAII ASTGTGTIPA  120
NFNSLNISLC NSDSSISAGP SHHFHSSVAP PPVRPHPNWD VERWDNELIA TTAHLFASGE  180
PVWTSSSTAT MFREFMNIPM ATPMTSPLGG GGGGGVGHSG LMAALNSFRP VEAGSQDERE  240
RNDHSMTTTE S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003613691.12e-49TCP family transcription factor
TrEMBLM0TJD63e-53M0TJD6_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr7P20990_0011e-52(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37443479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.12e-44TCP family protein